STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EER74625.1Toxin-antitoxin system, toxin component, MazF family; Toxic component of a type II toxin-antitoxin (TA) system. (120 aa)    
Predicted Functional Partners:
alr
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the P-Pant transferase superfamily. AcpS family.
       0.808
EER74624.1
Hypothetical protein; COG: COG3973; InterPro: IPR000212.
       0.559
EER75510.1
Transcriptional regulator, HxlR family; COG: COG1733; Pfam: PF01638; InterPro: IPR002577.
   
    0.520
EER74593.1
Transcriptional regulator, HxlR family; COG: COG1733; Pfam: PF01638; InterPro: IPR002577.
   
    0.520
srmB
DEAD/DEAH box helicase; COG: COG0513; Pfam: PF00270,PF00271; InterPro: IPR014001; Belongs to the DEAD box helicase family.
     
 0.511
trpS
tryptophan--tRNA ligase; COG: COG0180; Pfam: PF00579; InterPro: IPR002306; Belongs to the class-I aminoacyl-tRNA synthetase family.
       0.400
Your Current Organism:
Weissella paramesenteroides
NCBI taxonomy Id: 585506
Other names: W. paramesenteroides ATCC 33313, Weissella paramesenteroides ATCC 33313, Weissella paramesenteroides str. ATCC 33313, Weissella paramesenteroides strain ATCC 33313
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.