Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EER74761.1ABC transporter, ATP-binding protein; COG: COG0444; Pfam: PF00005,PF08352; InterPro: IPR003593; Belongs to the ABC transporter superfamily. (351 aa)    
Predicted Functional Partners:
EER74763.1
ABC transporter, permease protein; COG: COG1173; Pfam: PF00528; InterPro: IPR000515.
 0.999
EER74609.1
ABC transporter, permease protein; COG: COG1173; Pfam: PF00528; InterPro: IPR000515.
 0.996
EER74764.1
ABC transporter, permease protein; COG: COG0601; Pfam: PF00528; InterPro: IPR000515.
 
 0.995
EER74610.1
ABC transporter, permease protein; COG: COG0601; Pfam: PF00528; InterPro: IPR000515.
 
 0.982
EER74765.1
ABC transporter, substrate-binding protein, family 5; COG: COG4166; Pfam: PF00496; InterPro: IPR000914.
 
 
 0.982
oppA1
ABC transporter, substrate-binding protein, family 5; COG: COG4166; Pfam: PF00496; InterPro: IPR000914.
 
 
 0.957
oppA
ABC transporter, substrate-binding protein, family 5; COG: COG4166; Pfam: PF00496; InterPro: IPR000914.
 
 
 0.955
EER74611.1
ABC transporter, substrate-binding protein, family 5; COG: COG4166; Pfam: PF00496; InterPro: IPR000914.
 
 
 0.952
EER74249.1
ABC transporter, substrate-binding protein, family 5; COG: COG4166; Pfam: PF00496; InterPro: IPR000914.
 
 
 0.952
EER74760.1
ABC transporter, ATP-binding protein; COG: COG4608; Pfam: PF00005,PF08352; InterPro: IPR003593; Belongs to the ABC transporter superfamily.
 
  
0.907
Your Current Organism:
Weissella paramesenteroides
NCBI taxonomy Id: 585506
Other names: W. paramesenteroides ATCC 33313, Weissella paramesenteroides ATCC 33313, Weissella paramesenteroides str. ATCC 33313, Weissella paramesenteroides strain ATCC 33313
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