STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFK54805.1Hypothetical protein; Pfam: PF07512; InterPro: IPR011091. (268 aa)    
Predicted Functional Partners:
EFK54144.1
Hypothetical protein; COG: COG2124; Pfam: PF00067; InterPro: IPR001128; Belongs to the cytochrome P450 family.
  
 0.921
EFK55503.1
Nitrite/sulfite reductase ferredoxin domain protein; COG: COG0155; Pfam: PF03460,PF01077; InterPro: IPR006067; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
   
 0.889
EFK54163.1
Aminotransferase, class V; COG: COG1104; Pfam: PF00266; InterPro: IPR000192.
  
 0.846
EFK55502.1
Hypothetical protein; InterPro: IPR016040.
    
 0.824
EFK55553.1
Hypothetical protein; COG: COG0493; InterPro: IPR016040.
    
 0.824
EFK55555.1
Pyridine nucleotide-disulfide oxidoreductase; COG: COG0493; Pfam: PF07992; InterPro: IPR016040.
    
 0.824
EFK53922.1
SUF system FeS assembly protein, NifU family; COG: COG0822; Pfam: PF01592; InterPro: IPR011341.
  
 0.820
EFK54374.1
NAD dependent epimerase/dehydratase family protein; COG: COG0702; Pfam: PF01370; InterPro: IPR016040.
    
 
 0.776
EFK53576.1
Cytochrome b/b6 family protein; COG: COG1290; Pfam: PF00033; InterPro: IPR016175.
    
 0.753
EFK54610.1
Oxidoreductase, short chain dehydrogenase/reductase family protein; COG: COG1028; Pfam: PF00106; InterPro: IPR016040.
   
 0.743
Your Current Organism:
Corynebacterium genitalium
NCBI taxonomy Id: 585529
Other names: C. genitalium ATCC 33030, Corynebacterium genitalium ATCC 33030, Corynebacterium genitalium NCTC 11859, Corynebacterium genitalium str. ATCC 33030, Corynebacterium genitalium strain ATCC 33030
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.