STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFK55091.1Ppx/GppA phosphatase family protein; COG: COG0248; Pfam: PF02541; InterPro: IPR003695. (306 aa)    
Predicted Functional Partners:
EFK53505.1
Ppx/GppA phosphatase family protein; COG: COG0248; Pfam: PF02541; InterPro: IPR003695.
  
  
0.940
EFK53834.1
RelA/SpoT family protein; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.
   
 
 0.905
EFK55090.1
Hypothetical protein.
       0.843
EFK55092.1
Hypothetical protein.
       0.702
proC
Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.
       0.669
EFK55088.1
DNA binding domain, excisionase family; InterPro: IPR010093.
       0.550
EFK53825.1
DNA-binding regulatory protein, YebC/PmpR family; COG: COG0217; Pfam: PF01709; InterPro: IPR002876.
      
 0.455
EFK53504.1
Hypothetical protein; COG: COG1507; Pfam: PF04417; InterPro: IPR007511.
  
 
  0.438
EFK53801.1
ROK family protein; COG: COG1940; Pfam: PF00480.
     
 0.420
Your Current Organism:
Corynebacterium genitalium
NCBI taxonomy Id: 585529
Other names: C. genitalium ATCC 33030, Corynebacterium genitalium ATCC 33030, Corynebacterium genitalium NCTC 11859, Corynebacterium genitalium str. ATCC 33030, Corynebacterium genitalium strain ATCC 33030
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.