STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFK55206.1Hypothetical protein; COG: COG4861. (354 aa)    
Predicted Functional Partners:
EFK55205.1
Hypothetical protein; COG: COG4849.
 
  
 0.988
gluQ
Putative glutamyl-queuosine tRNA(Asp) synthetase; Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5-dihydroxy-2- cyclopenten-1-yl) moiety of the queuosine in the wobble position of the QUC anticodon; Belongs to the class-I aminoacyl-tRNA synthetase family. GluQ subfamily.
       0.773
EFK55189.1
DNA polymerase III, epsilon subunit.
  
     0.646
EFK55536.1
Hypothetical protein.
  
     0.628
EFK54962.1
Hypothetical protein.
  
     0.598
EFK55057.1
Hypothetical protein.
  
     0.551
EFK55207.1
Putative membrane protein; Involved in the import of queuosine (Q) precursors, required for Q precursor salvage; Belongs to the vitamin uptake transporter (VUT/ECF) (TC 2.A.88) family. Q precursor transporter subfamily.
       0.547
EFK54850.1
Tryptophan/tyrosine permease family protein; COG: COG0814; Pfam: PF01490.
  
     0.523
EFK54261.1
Glycosyl hydrolase family 32; Pfam: PF00251; InterPro: IPR001362; Belongs to the glycosyl hydrolase 32 family.
  
     0.519
EFK55342.1
Hypothetical protein.
  
     0.475
Your Current Organism:
Corynebacterium genitalium
NCBI taxonomy Id: 585529
Other names: C. genitalium ATCC 33030, Corynebacterium genitalium ATCC 33030, Corynebacterium genitalium NCTC 11859, Corynebacterium genitalium str. ATCC 33030, Corynebacterium genitalium strain ATCC 33030
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.