STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFK55382.1Rhodanese-like protein; COG: COG1054; Pfam: PF00581; InterPro: IPR001763; Belongs to the UPF0176 family. (297 aa)    
Predicted Functional Partners:
EFK55381.1
Hypothetical protein; COG: COG4868; Pfam: PF08903; InterPro: IPR014999.
       0.708
EFK53624.1
Pseudouridine synthase, RluA family; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.
      0.542
EFK55657.1
Thioesterase family protein; COG: COG1607; Pfam: PF03061; InterPro: IPR006683.
 
     0.435
EFK55379.1
Addiction module toxin, RelE/StbE family; COG: COG2026; Pfam: PF05016; InterPro: IPR007712.
       0.414
EFK55380.1
Hypothetical protein.
       0.414
EFK55404.1
RNA pseudouridine synthase; COG: COG0564; Pfam: PF00849; InterPro: IPR006145.
 
     0.412
Your Current Organism:
Corynebacterium genitalium
NCBI taxonomy Id: 585529
Other names: C. genitalium ATCC 33030, Corynebacterium genitalium ATCC 33030, Corynebacterium genitalium NCTC 11859, Corynebacterium genitalium str. ATCC 33030, Corynebacterium genitalium strain ATCC 33030
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