STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFK53636.1Hypothetical protein. (276 aa)    
Predicted Functional Partners:
EFK53637.1
Hypothetical protein.
       0.588
EFK53638.1
Hypothetical protein.
       0.541
EFK54930.1
Hypothetical protein.
   
  0.439
eccB
Type VII secretion protein EccB; Pfam: PF05108; InterPro: IPR007795.
   
  0.439
EFK55234.1
Mycobacterial cell wall arabinan synthesis protein; Pfam: PF04602; InterPro: IPR007680.
   
  0.439
EFK55490.1
Hypothetical protein.
   
  0.439
EFK54701.1
FG-GAP repeat protein; Pfam: PF02412.
   
  0.439
EFK54433.1
Hypothetical protein.
   
  0.439
Your Current Organism:
Corynebacterium genitalium
NCBI taxonomy Id: 585529
Other names: C. genitalium ATCC 33030, Corynebacterium genitalium ATCC 33030, Corynebacterium genitalium NCTC 11859, Corynebacterium genitalium str. ATCC 33030, Corynebacterium genitalium strain ATCC 33030
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.