Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EFK53865.1 | EFK53866.1 | HMPREF0291_11522 | HMPREF0291_11523 | Hypothetical protein. | Hypothetical protein. | 0.705 |
EFK53865.1 | EFK53867.1 | HMPREF0291_11522 | HMPREF0291_11524 | Hypothetical protein. | Hypothetical protein. | 0.566 |
EFK53865.1 | EFK53868.1 | HMPREF0291_11522 | HMPREF0291_11525 | Hypothetical protein. | Hypothetical protein. | 0.566 |
EFK53865.1 | EFK53869.1 | HMPREF0291_11522 | HMPREF0291_11526 | Hypothetical protein. | TIGR01777 family protein; COG: COG1090; Pfam: PF03364,PF01370,PF08338; InterPro: IPR010099. | 0.566 |
EFK53865.1 | pyrB | HMPREF0291_11522 | HMPREF0291_11528 | Hypothetical protein. | Aspartate carbamoyltransferase; COG: COG0540; Pfam: PF02729,PF00185; InterPro: IPR002082; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.404 |
EFK53865.1 | pyrC | HMPREF0291_11522 | HMPREF0291_11529 | Hypothetical protein. | Dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily. | 0.404 |
EFK53865.1 | pyrR | HMPREF0291_11522 | HMPREF0291_11527 | Hypothetical protein. | Phosphoribosyl transferase domain protein; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant. | 0.404 |
EFK53866.1 | EFK53865.1 | HMPREF0291_11523 | HMPREF0291_11522 | Hypothetical protein. | Hypothetical protein. | 0.705 |
EFK53866.1 | EFK53867.1 | HMPREF0291_11523 | HMPREF0291_11524 | Hypothetical protein. | Hypothetical protein. | 0.618 |
EFK53866.1 | EFK53868.1 | HMPREF0291_11523 | HMPREF0291_11525 | Hypothetical protein. | Hypothetical protein. | 0.618 |
EFK53866.1 | EFK53869.1 | HMPREF0291_11523 | HMPREF0291_11526 | Hypothetical protein. | TIGR01777 family protein; COG: COG1090; Pfam: PF03364,PF01370,PF08338; InterPro: IPR010099. | 0.618 |
EFK53866.1 | pyrB | HMPREF0291_11523 | HMPREF0291_11528 | Hypothetical protein. | Aspartate carbamoyltransferase; COG: COG0540; Pfam: PF02729,PF00185; InterPro: IPR002082; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.436 |
EFK53866.1 | pyrC | HMPREF0291_11523 | HMPREF0291_11529 | Hypothetical protein. | Dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily. | 0.436 |
EFK53866.1 | pyrR | HMPREF0291_11523 | HMPREF0291_11527 | Hypothetical protein. | Phosphoribosyl transferase domain protein; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant. | 0.436 |
EFK53867.1 | EFK53865.1 | HMPREF0291_11524 | HMPREF0291_11522 | Hypothetical protein. | Hypothetical protein. | 0.566 |
EFK53867.1 | EFK53866.1 | HMPREF0291_11524 | HMPREF0291_11523 | Hypothetical protein. | Hypothetical protein. | 0.618 |
EFK53867.1 | EFK53868.1 | HMPREF0291_11524 | HMPREF0291_11525 | Hypothetical protein. | Hypothetical protein. | 0.843 |
EFK53867.1 | EFK53869.1 | HMPREF0291_11524 | HMPREF0291_11526 | Hypothetical protein. | TIGR01777 family protein; COG: COG1090; Pfam: PF03364,PF01370,PF08338; InterPro: IPR010099. | 0.849 |
EFK53867.1 | pyrB | HMPREF0291_11524 | HMPREF0291_11528 | Hypothetical protein. | Aspartate carbamoyltransferase; COG: COG0540; Pfam: PF02729,PF00185; InterPro: IPR002082; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.687 |
EFK53867.1 | pyrC | HMPREF0291_11524 | HMPREF0291_11529 | Hypothetical protein. | Dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily. | 0.687 |
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