STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFK54163.1Aminotransferase, class V; COG: COG1104; Pfam: PF00266; InterPro: IPR000192. (368 aa)    
Predicted Functional Partners:
EFK53922.1
SUF system FeS assembly protein, NifU family; COG: COG0822; Pfam: PF01592; InterPro: IPR011341.
 
 0.999
EFK54569.1
Hypothetical protein; COG: COG0425; Pfam: PF01206; InterPro: IPR001455.
   
 0.982
EFK54560.1
ThiF family protein; COG: COG0476; Pfam: PF00899,PF05237; InterPro: IPR016040.
 
 
 0.972
EFK54848.1
Rhodanese-like protein; COG: COG2897; Pfam: PF00581; InterPro: IPR001763.
    
 0.910
EFK55535.1
Rhodanese-like protein; COG: COG2897; Pfam: PF00581; InterPro: IPR001763.
    
 0.910
EFK54167.1
Hydrolase, NUDIX family; COG: COG0494; Pfam: PF00293.
    
  0.865
EFK55466.1
Putative acyl carrier protein; COG: COG3321; Pfam: PF00550,PF00109,PF02801,PF00698,PF00975; InterPro: IPR000794.
    
 
 0.861
EFK53512.1
Putative acyl carrier protein; Pfam: PF00550.
    
 
 0.857
etfA
Electron transfer flavoprotein FAD-binding domain protein; COG: COG2025; Pfam: PF01012,PF00766; InterPro: IPR014729.
  
    0.847
EFK54805.1
Hypothetical protein; Pfam: PF07512; InterPro: IPR011091.
  
 0.846
Your Current Organism:
Corynebacterium genitalium
NCBI taxonomy Id: 585529
Other names: C. genitalium ATCC 33030, Corynebacterium genitalium ATCC 33030, Corynebacterium genitalium NCTC 11859, Corynebacterium genitalium str. ATCC 33030, Corynebacterium genitalium strain ATCC 33030
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.