STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ttgRTranscriptional regulator, TetR family; Pfam: PF00440; InterPro: IPR012287. (187 aa)    
Predicted Functional Partners:
EFG48682.1
Transporter, major facilitator family protein; Pfam: PF07690; InterPro: IPR011701.
 
     0.808
EFG46727.1
Transcriptional regulator, TetR family; Pfam: PF00440; InterPro: IPR012287.
  
     0.562
EFG48456.1
Hypothetical protein.
  
     0.451
EFG48686.1
DsbA-like protein; COG: COG1651; Pfam: PF01323; InterPro: IPR001853.
 
     0.405
Your Current Organism:
Brevibacterium mcbrellneri
NCBI taxonomy Id: 585530
Other names: B. mcbrellneri ATCC 49030, Brevibacterium mcbrellneri ATCC 49030, Brevibacterium mcbrellneri str. ATCC 49030, Brevibacterium mcbrellneri strain ATCC 49030
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.