STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFG48510.1Sucrase/ferredoxin-like protein; Pfam: PF06999; InterPro: IPR009737. (299 aa)    
Predicted Functional Partners:
EFG48513.1
Mycothiol-dependent formaldehyde dehydrogenase; COG: COG1062; Pfam: PF08240,PF00107; InterPro: IPR002085.
 
     0.782
EFG48511.1
Na+/H+ antiporter family protein; COG: COG1757; Pfam: PF03553; InterPro: IPR004770.
       0.723
EFG48512.1
Metallo-beta-lactamase domain protein; COG: COG0491; Pfam: PF00753; InterPro: IPR001279.
       0.723
EFG48509.1
Hypothetical protein.
 
     0.674
EFG48514.1
Sodium:neurotransmitter symporter family protein; COG: COG0733; Pfam: PF00209; InterPro: IPR000175; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
       0.413
Your Current Organism:
Brevibacterium mcbrellneri
NCBI taxonomy Id: 585530
Other names: B. mcbrellneri ATCC 49030, Brevibacterium mcbrellneri ATCC 49030, Brevibacterium mcbrellneri str. ATCC 49030, Brevibacterium mcbrellneri strain ATCC 49030
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.