STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFG48059.1Transglycosylase; COG: COG0744; Pfam: PF00912,PF00905; InterPro: IPR001460. (768 aa)    
Predicted Functional Partners:
EFG46638.1
Serine-type D-Ala-D-Ala carboxypeptidase; COG: COG1686; Pfam: PF00768; InterPro: IPR001967; Belongs to the peptidase S11 family.
  
 
 0.922
EFG48624.1
Penicillin-binding protein, transpeptidase domain protein; Pfam: PF03717,PF00905.
  
 
 0.920
EFG48202.1
DivIVA domain protein; Pfam: PF05103.
   
 
 0.913
EFG48189.1
Penicillin-binding protein, transpeptidase domain protein; COG: COG0768; Pfam: PF03717,PF00905; InterPro: IPR001460.
  
 
 0.898
mrdA
Penicillin-binding protein, transpeptidase domain protein; COG: COG0768; Pfam: PF00905; InterPro: IPR001460.
  
 
0.839
amiD2
Putative N-acetylmuramoyl-L-alanine amidase; COG: COG0860; Pfam: PF01471; InterPro: IPR002508.
   
 0.830
EFG48379.1
Serine-type D-Ala-D-Ala carboxypeptidase; Pfam: PF02557; InterPro: IPR003709.
  
  
  0.726
ftsW
Cell division protein FtsW; COG: COG0772; Pfam: PF01098; InterPro: IPR001182; Belongs to the SEDS family.
  
 
 
 0.652
EFG48060.1
Hypothetical protein; 1.14.99.36.
  
    0.652
mraY
phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.
  
  
 0.629
Your Current Organism:
Brevibacterium mcbrellneri
NCBI taxonomy Id: 585530
Other names: B. mcbrellneri ATCC 49030, Brevibacterium mcbrellneri ATCC 49030, Brevibacterium mcbrellneri str. ATCC 49030, Brevibacterium mcbrellneri strain ATCC 49030
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.