Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EFG47923.1 | EFG47924.1 | HMPREF0183_0816 | HMPREF0183_0817 | Hypothetical protein. | Hypothetical protein. | 0.557 |
EFG47923.1 | suhB | HMPREF0183_0816 | HMPREF0183_0815 | Hypothetical protein. | Inositol monophosphatase family protein; COG: COG0483; Pfam: PF00459; InterPro: IPR000760. | 0.773 |
EFG47924.1 | EFG47923.1 | HMPREF0183_0817 | HMPREF0183_0816 | Hypothetical protein. | Hypothetical protein. | 0.557 |
EFG47924.1 | suhB | HMPREF0183_0817 | HMPREF0183_0815 | Hypothetical protein. | Inositol monophosphatase family protein; COG: COG0483; Pfam: PF00459; InterPro: IPR000760. | 0.557 |
suhB | EFG47923.1 | HMPREF0183_0815 | HMPREF0183_0816 | Inositol monophosphatase family protein; COG: COG0483; Pfam: PF00459; InterPro: IPR000760. | Hypothetical protein. | 0.773 |
suhB | EFG47924.1 | HMPREF0183_0815 | HMPREF0183_0817 | Inositol monophosphatase family protein; COG: COG0483; Pfam: PF00459; InterPro: IPR000760. | Hypothetical protein. | 0.557 |