STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
copCCopper resistance protein CopC; Pfam: PF04234; InterPro: IPR007348. (218 aa)    
Predicted Functional Partners:
EFG48167.1
Hypothetical protein; Pfam: PF04314; InterPro: IPR007410.
 
    0.947
EFG48105.1
cytoChrome c oxidase Caa3 assembly factor; COG: COG3336; Pfam: PF05425.
 
  
 0.887
EFG47406.1
Pyridine nucleotide-disulfide oxidoreductase; Pfam: PF07992,PF00070; InterPro: IPR013027.
    
   0.823
EFG47773.1
Membrane protein.
  
    0.729
EFG48168.1
Putative Tat-translocated enzyme; COG: COG2837; Pfam: PF04261; InterPro: IPR006314.
 
    0.713
EFG46501.1
Tat-translocated enzyme; Involved in the recovery of exogenous heme iron. Extracts iron from heme while preserving the tetrapyrrol ring intact. Belongs to the DyP-type peroxidase family.
  
    0.640
EFG47684.1
Transporter, major facilitator family protein; Pfam: PF07690; InterPro: IPR011701.
 
    0.527
EFG48243.1
Hypothetical protein.
  
  
  0.503
EFG46552.1
Hypothetical protein.
  
     0.410
pth
aminoacyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.
      
 0.402
Your Current Organism:
Brevibacterium mcbrellneri
NCBI taxonomy Id: 585530
Other names: B. mcbrellneri ATCC 49030, Brevibacterium mcbrellneri ATCC 49030, Brevibacterium mcbrellneri str. ATCC 49030, Brevibacterium mcbrellneri strain ATCC 49030
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.