STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFG47534.1GDSL-like protein; Pfam: PF00657; InterPro: IPR013831. (270 aa)    
Predicted Functional Partners:
dcp
Peptidase family M3; COG: COG0339; Pfam: PF01432; InterPro: IPR001567.
       0.773
EFG47384.1
Hypothetical protein.
   
  0.716
EFG46373.1
Hypothetical protein.
   
  0.716
folK
2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.
    
  0.667
ynfM
Transporter, major facilitator family protein; Pfam: PF07690; InterPro: IPR011701.
       0.567
EFG48243.1
Hypothetical protein.
    
  0.553
EFG48172.1
Conserved repeat protein; Pfam: PF00746.
    
  0.553
EFG46539.1
Hypothetical protein.
    
  0.553
Your Current Organism:
Brevibacterium mcbrellneri
NCBI taxonomy Id: 585530
Other names: B. mcbrellneri ATCC 49030, Brevibacterium mcbrellneri ATCC 49030, Brevibacterium mcbrellneri str. ATCC 49030, Brevibacterium mcbrellneri strain ATCC 49030
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.