STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFG47556.1ABC transporter, ATP-binding protein; COG: COG1121; Pfam: PF00005; InterPro: IPR003593. (276 aa)    
Predicted Functional Partners:
EFG47557.1
ABC 3 transport family protein; COG: COG1108; Pfam: PF00950; InterPro: IPR001626.
 
 0.995
EFG47555.1
ABC transporter, substrate-binding protein; Pfam: PF01297; InterPro: IPR006127; Belongs to the bacterial solute-binding protein 9 family.
 
 
 0.993
EFG46844.1
Anchored repeat-type ABC transporter, permease subunit; COG: COG1108; Pfam: PF00950; InterPro: IPR001626.
 
 0.930
EFG46495.1
Hypothetical protein.
  
 0.918
EFG46460.1
ABC 3 transport family protein; COG: COG1108; Pfam: PF00950; InterPro: IPR001626.
  
 0.918
EFG46847.1
Anchored repeat ABC transporter, substrate-binding protein; COG: COG0803; Pfam: PF01297; InterPro: IPR006127; Belongs to the bacterial solute-binding protein 9 family.
  
 
 0.881
sitA
ABC transporter, substrate-binding protein; COG: COG0803; Pfam: PF01297; InterPro: IPR006127; Belongs to the bacterial solute-binding protein 9 family.
  
 
 0.881
EFG47558.1
Ser/Thr phosphatase family protein; COG: COG1408; Pfam: PF00149; InterPro: IPR004843.
       0.610
EFG46846.1
Actinobacterial surface-anchored domain protein.
  
 
  0.566
lysC
Aspartate kinase, monofunctional class; COG: COG0527; Pfam: PF00696,PF01842; InterPro: IPR005260; Belongs to the aspartokinase family.
       0.529
Your Current Organism:
Brevibacterium mcbrellneri
NCBI taxonomy Id: 585530
Other names: B. mcbrellneri ATCC 49030, Brevibacterium mcbrellneri ATCC 49030, Brevibacterium mcbrellneri str. ATCC 49030, Brevibacterium mcbrellneri strain ATCC 49030
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.