STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFG47335.1Hypothetical protein; Pfam: PF01925; InterPro: IPR002781. (266 aa)    
Predicted Functional Partners:
EFG47954.1
Metallo-beta-lactamase domain protein; COG: COG0491; Pfam: PF00753,PF00581; InterPro: IPR001279.
 
  
 0.577
EFG47336.1
Amidohydrolase family protein; COG: COG1574; Pfam: PF07969; InterPro: IPR013108.
       0.550
EFG47955.1
Hypothetical protein; COG: COG1937; Pfam: PF02583; InterPro: IPR003735.
     
 0.526
EFG47333.1
ABC transporter, permease protein; COG: COG0765; Pfam: PF00528; InterPro: IPR000515.
  
    0.515
EFG47334.1
ABC transporter, ATP-binding protein; COG: COG1126; Pfam: PF00005; InterPro: IPR003593.
  
    0.515
pheT
phenylalanine--tRNA ligase, beta subunit; COG: COG0072; Pfam: PF01588,PF03483,PF03484,PF03147; InterPro: IPR004532; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
     
 0.503
thiF
Molybdopterin biosynthesis protein MoeB; COG: COG0476; Pfam: PF00899,PF05237,PF00581; InterPro: IPR016040.
  
  
 0.443
Your Current Organism:
Brevibacterium mcbrellneri
NCBI taxonomy Id: 585530
Other names: B. mcbrellneri ATCC 49030, Brevibacterium mcbrellneri ATCC 49030, Brevibacterium mcbrellneri str. ATCC 49030, Brevibacterium mcbrellneri strain ATCC 49030
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.