Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EFG47292.1 | EFG47293.1 | HMPREF0183_1432 | HMPREF0183_1433 | Putative RNA methyltransferase, TrmH family, group 2; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily. | Hypothetical protein. | 0.606 |
| EFG47292.1 | EFG47294.1 | HMPREF0183_1432 | HMPREF0183_1434 | Putative RNA methyltransferase, TrmH family, group 2; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily. | Hypothetical protein; COG: COG0389; InterPro: IPR001126. | 0.605 |
| EFG47292.1 | dnaE | HMPREF0183_1432 | HMPREF0183_1435 | Putative RNA methyltransferase, TrmH family, group 2; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily. | DNA polymerase III, alpha subunit; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase. | 0.607 |
| EFG47292.1 | thiD-2 | HMPREF0183_1432 | HMPREF0183_1431 | Putative RNA methyltransferase, TrmH family, group 2; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily. | Putative phosphomethylpyrimidine kinase; COG: COG0351; Pfam: PF08543; InterPro: IPR013749. | 0.526 |
| EFG47293.1 | EFG47292.1 | HMPREF0183_1433 | HMPREF0183_1432 | Hypothetical protein. | Putative RNA methyltransferase, TrmH family, group 2; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily. | 0.606 |
| EFG47293.1 | EFG47294.1 | HMPREF0183_1433 | HMPREF0183_1434 | Hypothetical protein. | Hypothetical protein; COG: COG0389; InterPro: IPR001126. | 0.993 |
| EFG47293.1 | dnaE | HMPREF0183_1433 | HMPREF0183_1435 | Hypothetical protein. | DNA polymerase III, alpha subunit; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase. | 0.976 |
| EFG47294.1 | EFG47292.1 | HMPREF0183_1434 | HMPREF0183_1432 | Hypothetical protein; COG: COG0389; InterPro: IPR001126. | Putative RNA methyltransferase, TrmH family, group 2; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily. | 0.605 |
| EFG47294.1 | EFG47293.1 | HMPREF0183_1434 | HMPREF0183_1433 | Hypothetical protein; COG: COG0389; InterPro: IPR001126. | Hypothetical protein. | 0.993 |
| EFG47294.1 | dnaE | HMPREF0183_1434 | HMPREF0183_1435 | Hypothetical protein; COG: COG0389; InterPro: IPR001126. | DNA polymerase III, alpha subunit; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase. | 0.977 |
| dnaE | EFG47292.1 | HMPREF0183_1435 | HMPREF0183_1432 | DNA polymerase III, alpha subunit; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase. | Putative RNA methyltransferase, TrmH family, group 2; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily. | 0.607 |
| dnaE | EFG47293.1 | HMPREF0183_1435 | HMPREF0183_1433 | DNA polymerase III, alpha subunit; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase. | Hypothetical protein. | 0.976 |
| dnaE | EFG47294.1 | HMPREF0183_1435 | HMPREF0183_1434 | DNA polymerase III, alpha subunit; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase. | Hypothetical protein; COG: COG0389; InterPro: IPR001126. | 0.977 |
| dnaE | thiD-2 | HMPREF0183_1435 | HMPREF0183_1431 | DNA polymerase III, alpha subunit; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase. | Putative phosphomethylpyrimidine kinase; COG: COG0351; Pfam: PF08543; InterPro: IPR013749. | 0.406 |
| thiD-2 | EFG47292.1 | HMPREF0183_1431 | HMPREF0183_1432 | Putative phosphomethylpyrimidine kinase; COG: COG0351; Pfam: PF08543; InterPro: IPR013749. | Putative RNA methyltransferase, TrmH family, group 2; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily. | 0.526 |
| thiD-2 | dnaE | HMPREF0183_1431 | HMPREF0183_1435 | Putative phosphomethylpyrimidine kinase; COG: COG0351; Pfam: PF08543; InterPro: IPR013749. | DNA polymerase III, alpha subunit; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase. | 0.406 |