STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFG47090.1Methyltransferase domain protein; Pfam: PF08241; InterPro: IPR013216. (242 aa)    
Predicted Functional Partners:
EFG47091.1
Endonuclease/exonuclease/phosphatase family protein; Pfam: PF03372.
       0.773
gcvP
Glycine dehydrogenase; COG: COG1003; Pfam: PF02347,PF01212; InterPro: IPR003437; Belongs to the GcvP family.
     
 0.739
metX
Homoserine O-acetyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine.
  
  
 0.731
EFG47092.1
Hypothetical protein; COG: COG1167; InterPro: IPR015421; 2.6.1.1.
       0.572
EFG48120.1
Oxidoreductase, short chain dehydrogenase/reductase family protein; Pfam: PF01370; InterPro: IPR016040.
  
  
  0.529
EFG48445.1
Hypothetical protein; Pfam: PF00561; 3.3.2.9.
  
  
  0.432
EFG47566.1
Hypothetical protein; Pfam: PF00665; InterPro: IPR001584.
  
     0.411
Your Current Organism:
Brevibacterium mcbrellneri
NCBI taxonomy Id: 585530
Other names: B. mcbrellneri ATCC 49030, Brevibacterium mcbrellneri ATCC 49030, Brevibacterium mcbrellneri str. ATCC 49030, Brevibacterium mcbrellneri strain ATCC 49030
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.