STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rimJAcetyltransferase, GNAT family; COG: COG1670; Pfam: PF00583; InterPro: IPR016181. (203 aa)    
Predicted Functional Partners:
galU
UTP--glucose-1-phosphate uridylyltransferase; COG: COG1210; Pfam: PF00483; InterPro: IPR005835.
  
    0.829
EFG46888.1
Hypothetical protein.
       0.773
rimI
Putative ribosomal-protein-alanine acetyltransferase; COG: COG0456; Pfam: PF00583; InterPro: IPR016181.
   
 
 0.677
fthC
5-formyltetrahydrofolate cyclo-ligase; COG: COG0212; Pfam: PF01812; InterPro: IPR002698; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family.
  
    0.636
EFG46886.1
Hypothetical protein.
       0.578
EFG46891.1
Putative regulatory protein (CxxC_CxxC_SSSS); COG: COG2331; InterPro: IPR013429.
       0.484
EFG46531.1
Acetyltransferase, GNAT family; Pfam: PF00583; InterPro: IPR016181.
  
   
 0.435
Your Current Organism:
Brevibacterium mcbrellneri
NCBI taxonomy Id: 585530
Other names: B. mcbrellneri ATCC 49030, Brevibacterium mcbrellneri ATCC 49030, Brevibacterium mcbrellneri str. ATCC 49030, Brevibacterium mcbrellneri strain ATCC 49030
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.