STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFG46738.1Hypothetical protein; Pfam: PF03781; InterPro: IPR005532. (112 aa)    
Predicted Functional Partners:
EFG46750.1
Hypothetical protein; Pfam: PF07563; InterPro: IPR011438.
  
   0.837
ribB
3,4-dihydroxy-2-butanone-4-phosphate synthase; Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate; Belongs to the GTP cyclohydrolase II family.
    
  0.677
EFG48446.1
Hypothetical protein.
  
     0.468
EFG48521.1
Kinase domain protein; COG: COG0515; Pfam: PF00069; InterPro: IPR002290.
 
 
  0.442
EFG48327.1
Transcriptional regulator, ArsR family; Pfam: PF01022; InterPro: IPR011991.
  
     0.422
pknA
Kinase domain protein; COG: COG0515; Pfam: PF00069; InterPro: IPR002290.
 
 
  0.418
ydfG
Oxidoreductase, short chain dehydrogenase/reductase family protein; COG: COG4221; Pfam: PF00106; InterPro: IPR002198.
      
 0.414
EFG48445.1
Hypothetical protein; Pfam: PF00561; 3.3.2.9.
  
     0.411
EFG46570.1
Transcriptional regulator, TetR family; Pfam: PF00440; InterPro: IPR001647.
  
     0.400
Your Current Organism:
Brevibacterium mcbrellneri
NCBI taxonomy Id: 585530
Other names: B. mcbrellneri ATCC 49030, Brevibacterium mcbrellneri ATCC 49030, Brevibacterium mcbrellneri str. ATCC 49030, Brevibacterium mcbrellneri strain ATCC 49030
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.