Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EFG46739.1 | EFG46740.1 | HMPREF0183_1983 | HMPREF0183_1984 | Hypothetical protein. | Hypothetical protein; Pfam: PF08751. | 0.992 |
EFG46739.1 | EFG46741.1 | HMPREF0183_1983 | HMPREF0183_1985 | Hypothetical protein. | TrwC relaxase; Pfam: PF08751. | 0.993 |
EFG46739.1 | EFG46742.1 | HMPREF0183_1983 | HMPREF0183_1980 | Hypothetical protein. | ParB-like protein; Pfam: PF02195. | 0.770 |
EFG46739.1 | EFG46743.1 | HMPREF0183_1983 | HMPREF0183_1981 | Hypothetical protein. | Hypothetical protein. | 0.772 |
EFG46739.1 | EFG46781.1 | HMPREF0183_1983 | HMPREF0183_1941 | Hypothetical protein. | Hypothetical protein. | 0.773 |
EFG46739.1 | EFG47415.1 | HMPREF0183_1983 | HMPREF0183_1310 | Hypothetical protein. | Hypothetical protein; COG: COG0507. | 0.919 |
EFG46739.1 | EFG47762.1 | HMPREF0183_1983 | HMPREF0183_0964 | Hypothetical protein. | Hypothetical protein; Pfam: PF08751; InterPro: IPR014862. | 0.970 |
EFG46739.1 | EFG48448.1 | HMPREF0183_1983 | HMPREF0183_0264 | Hypothetical protein. | Hypothetical protein; 3.6.1.11. | 0.773 |
EFG46739.1 | EFG48451.1 | HMPREF0183_1983 | HMPREF0183_0267 | Hypothetical protein. | Hypothetical protein. | 0.960 |
EFG46739.1 | uvrD | HMPREF0183_1983 | HMPREF0183_0321 | Hypothetical protein. | HRDC domain protein; COG: COG0210; Pfam: PF00580,PF00570; InterPro: IPR000212. | 0.782 |
EFG46740.1 | EFG46739.1 | HMPREF0183_1984 | HMPREF0183_1983 | Hypothetical protein; Pfam: PF08751. | Hypothetical protein. | 0.992 |
EFG46740.1 | EFG46741.1 | HMPREF0183_1984 | HMPREF0183_1985 | Hypothetical protein; Pfam: PF08751. | TrwC relaxase; Pfam: PF08751. | 0.994 |
EFG46740.1 | EFG46742.1 | HMPREF0183_1984 | HMPREF0183_1980 | Hypothetical protein; Pfam: PF08751. | ParB-like protein; Pfam: PF02195. | 0.771 |
EFG46740.1 | EFG46743.1 | HMPREF0183_1984 | HMPREF0183_1981 | Hypothetical protein; Pfam: PF08751. | Hypothetical protein. | 0.773 |
EFG46740.1 | EFG46781.1 | HMPREF0183_1984 | HMPREF0183_1941 | Hypothetical protein; Pfam: PF08751. | Hypothetical protein. | 0.774 |
EFG46740.1 | EFG47415.1 | HMPREF0183_1984 | HMPREF0183_1310 | Hypothetical protein; Pfam: PF08751. | Hypothetical protein; COG: COG0507. | 0.935 |
EFG46740.1 | EFG47762.1 | HMPREF0183_1984 | HMPREF0183_0964 | Hypothetical protein; Pfam: PF08751. | Hypothetical protein; Pfam: PF08751; InterPro: IPR014862. | 0.976 |
EFG46740.1 | EFG48448.1 | HMPREF0183_1984 | HMPREF0183_0264 | Hypothetical protein; Pfam: PF08751. | Hypothetical protein; 3.6.1.11. | 0.770 |
EFG46740.1 | EFG48451.1 | HMPREF0183_1984 | HMPREF0183_0267 | Hypothetical protein; Pfam: PF08751. | Hypothetical protein. | 0.969 |
EFG46740.1 | uvrD | HMPREF0183_1984 | HMPREF0183_0321 | Hypothetical protein; Pfam: PF08751. | HRDC domain protein; COG: COG0210; Pfam: PF00580,PF00570; InterPro: IPR000212. | 0.782 |
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