Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
xerCSite-specific tyrosine recombinase XerC; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. (329 aa)    
Predicted Functional Partners:
EFG47232.1
Phosphoribosyl transferase domain protein; Pfam: PF00156.
   
    0.781
EFG46497.1
Aldehyde dehydrogenase (NAD) family protein; COG: COG1012; Pfam: PF01619,PF00171; InterPro: IPR015590; Belongs to the aldehyde dehydrogenase family.
     
  0.733
ftsK
FtsK/SpoIIIE family protein; COG: COG1674; Pfam: PF01580; InterPro: IPR002543.
  
   
 0.721
sucA
Oxoglutarate dehydrogenase (succinyl-transferring), E1 component; COG: COG0567; Pfam: PF00198,PF00676,PF02779; InterPro: IPR011603.
     
  0.710
tyrA
Prephenate dehydrogenase; COG: COG0287; Pfam: PF02153,PF01842; InterPro: IPR003099.
  
    0.702
EFG47883.1
Hypothetical protein; COG: COG2135; Pfam: PF02586; InterPro: IPR003738; Belongs to the SOS response-associated peptidase family.
   
    0.692
whiA
Hypothetical protein; Involved in cell division and chromosome segregation.
   
    0.692
EFG46696.1
Hypothetical protein.
       0.618
EFG46697.1
Transporter, major facilitator family protein; Pfam: PF07690; InterPro: IPR011701.
       0.618
EFG46698.1
ATP-grasp domain protein; Pfam: PF02655.
       0.618
Your Current Organism:
Brevibacterium mcbrellneri
NCBI taxonomy Id: 585530
Other names: B. mcbrellneri ATCC 49030, Brevibacterium mcbrellneri ATCC 49030, Brevibacterium mcbrellneri str. ATCC 49030, Brevibacterium mcbrellneri strain ATCC 49030
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