Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EFG46701.1Peptidase, M23 family; Pfam: PF01551,PF02557; InterPro: IPR003709. (332 aa)    
Predicted Functional Partners:
amiD2
Putative N-acetylmuramoyl-L-alanine amidase; COG: COG0860; Pfam: PF01471; InterPro: IPR002508.
    
 0.817
EFG46638.1
Serine-type D-Ala-D-Ala carboxypeptidase; COG: COG1686; Pfam: PF00768; InterPro: IPR001967; Belongs to the peptidase S11 family.
 
 
 0.658
EFG47931.1
Hypothetical protein.
  
     0.639
mutT
Hydrolase, NUDIX family; Pfam: PF00293; InterPro: IPR000086.
  
     0.581
EFG48415.1
Hypothetical protein.
 
   
 0.563
dacB
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; COG: COG2027; Pfam: PF02113; InterPro: IPR000667.
 
 
 0.552
EFG47326.1
Distant family protein of PhoU.
  
     0.539
EFG47102.1
GIY-YIG catalytic domain protein; COG: COG0322; Pfam: PF00929,PF01541; InterPro: IPR006054.
 
     0.538
EFG46700.1
Hypothetical protein; COG: COG0702; Pfam: PF05368; InterPro: IPR016040.
       0.536
EFG47572.1
Hypothetical protein; Similar to group B streptococcal surface immunogenic protein.
 
  
 0.526
Your Current Organism:
Brevibacterium mcbrellneri
NCBI taxonomy Id: 585530
Other names: B. mcbrellneri ATCC 49030, Brevibacterium mcbrellneri ATCC 49030, Brevibacterium mcbrellneri str. ATCC 49030, Brevibacterium mcbrellneri strain ATCC 49030
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