STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
acxCAcetone carboxylase gamma subunit; COG: COG4647; Pfam: PF08882; InterPro: IPR014979. (167 aa)    
Predicted Functional Partners:
acxB
Hydantoinase B/oxoprolinase; COG: COG0146; Pfam: PF02538; InterPro: IPR003692.
 
 0.999
hyuA
Hydantoinase/oxoprolinase; COG: COG0145; Pfam: PF05378,PF01968; InterPro: IPR002821.
 
 
 0.985
EFG46626.1
Hydantoinase/oxoprolinase; COG: COG0145; Pfam: PF05378,PF01968; InterPro: IPR002821.
   
 0.879
EFG47888.1
GAF domain protein; Pfam: PF01590,PF00486.
 
     0.513
Your Current Organism:
Brevibacterium mcbrellneri
NCBI taxonomy Id: 585530
Other names: B. mcbrellneri ATCC 49030, Brevibacterium mcbrellneri ATCC 49030, Brevibacterium mcbrellneri str. ATCC 49030, Brevibacterium mcbrellneri strain ATCC 49030
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.