STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFG46530.1Periplasmic binding protein; Pfam: PF01497; InterPro: IPR002491. (276 aa)    
Predicted Functional Partners:
hmuU
Iron chelate uptake ABC transporter, FeCT family, permease protein; COG: COG0609; Pfam: PF01032; InterPro: IPR000522; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.959
hmuU2
Putative corrinoid ABC transporter permease; COG: COG0609; Pfam: PF01032; InterPro: IPR000522; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.956
EFG47144.1
ABC transporter, ATP-binding protein; COG: COG4559; Pfam: PF00005; InterPro: IPR003593.
 
 0.949
fhuB
Iron chelate uptake ABC transporter, FeCT family, permease protein; Pfam: PF01032; InterPro: IPR000522; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.936
btuD
Corrinoid ABC transporter ATPase; COG: COG1120; Pfam: PF00005; InterPro: IPR003593.
 
 0.913
EFG48484.1
ABC transporter, ATP-binding protein; COG: COG1120; Pfam: PF00005; InterPro: IPR003593.
 
 0.901
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
  
  
 0.681
EFG46603.1
ABC transporter, permease protein; COG: COG1178; Pfam: PF00528; InterPro: IPR000515.
  
    0.462
hemD
uroporphyrinogen-III synthase; COG: COG1587; Pfam: PF00590,PF02602; InterPro: IPR003754; Belongs to the precorrin methyltransferase family.
     
 0.456
EFG46499.1
FTR1 family protein; COG: COG0672; Pfam: PF03239; InterPro: IPR004923.
   
  
 0.433
Your Current Organism:
Brevibacterium mcbrellneri
NCBI taxonomy Id: 585530
Other names: B. mcbrellneri ATCC 49030, Brevibacterium mcbrellneri ATCC 49030, Brevibacterium mcbrellneri str. ATCC 49030, Brevibacterium mcbrellneri strain ATCC 49030
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.