STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFG46339.1YhgE/Pip domain protein; COG: COG1511. (877 aa)    
Predicted Functional Partners:
EFG46338.1
MMPL family protein; COG: COG2409; Pfam: PF03176.
    0.959
EFG46337.1
Transcriptional regulator, TetR family; Pfam: PF00440; InterPro: IPR001647.
 
    0.869
EFG47859.1
Von Willebrand factor type A domain protein; Pfam: PF00092.
  
     0.485
EFG46336.1
Hypothetical protein.
       0.481
EFG47886.1
Hypothetical protein; Pfam: PF09335.
  
   
 0.427
Your Current Organism:
Brevibacterium mcbrellneri
NCBI taxonomy Id: 585530
Other names: B. mcbrellneri ATCC 49030, Brevibacterium mcbrellneri ATCC 49030, Brevibacterium mcbrellneri str. ATCC 49030, Brevibacterium mcbrellneri strain ATCC 49030
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.