Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EFQ83705.1Hypothetical protein. (273 aa)    
Predicted Functional Partners:
dapD
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; Catalyzes the conversion of the cyclic tetrahydrodipicolinate (THDP) into the acyclic N-succinyl-L-2-amino-6-oxopimelate using succinyl-CoA.
 
     0.840
EFQ83703.1
Putative RNA methyltransferase, TrmH family, group 2; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily.
       0.764
guaA
GMP synthase (glutamine-hydrolyzing) domain protein; Catalyzes the synthesis of GMP from XMP.
    
 0.727
EFQ82788.1
Hypothetical protein.
  
     0.669
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
    
  0.663
EFQ83088.1
Methionine synthase, vitamin-B12 independent; Pfam: PF01717.
  
     0.649
EFQ84196.1
Hypothetical protein.
  
     0.598
EFQ82668.1
Hypothetical protein.
 
 
 
 0.577
glpX
Fructose-1,6-bisphosphatase, class II; COG: COG1494; Pfam: PF03320; InterPro: IPR004464.
       0.568
EFQ83707.1
Hydrolase, alpha/beta domain protein; COG: COG0596; Pfam: PF00561; InterPro: IPR000073.
       0.568
Your Current Organism:
Aeromicrobium marinum
NCBI taxonomy Id: 585531
Other names: A. marinum DSM 15272, Aeromicrobium marinum DSM 15272, Aeromicrobium marinum T2, Aeromicrobium marinum str. DSM 15272, Aeromicrobium marinum strain DSM 15272
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