Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EFQ82475.1Transcriptional regulator, AraC family; Pfam: PF00165; InterPro: IPR000005. (345 aa)    
Predicted Functional Partners:
EFQ83807.1
Class II glutamine amidotransferase; COG: COG0069; Pfam: PF00310,PF04898,PF01645,PF01493; InterPro: IPR013785.
    
 0.851
EFQ82762.1
Transcriptional regulator, AraC family; COG: COG2207; Pfam: PF00165; InterPro: IPR000005.
  
     0.760
ribB
3,4-dihydroxy-2-butanone-4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
  0.665
EFQ82793.1
HAMP domain protein; COG: COG2114; Pfam: PF00672,PF00211; InterPro: IPR003660.
   
 
  0.651
EFQ83204.1
Putative acetyl-CoA carboxylase, carboxyl transferase, beta subunit; COG: COG0777; Pfam: PF01039; InterPro: IPR000022.
     
  0.632
rpoA
DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.629
EFQ83381.1
Glutamine amidotransferase, class I; COG: COG0147; Pfam: PF04715,PF00425,PF01063,PF00117; InterPro: IPR005801.
     
  0.576
EFQ82477.1
Thiolase, C-terminal domain protein; COG: COG0183; Pfam: PF00109,PF02803; InterPro: IPR016038; Belongs to the thiolase-like superfamily. Thiolase family.
    
  0.556
EFQ82476.1
MaoC-like protein; Pfam: PF01575; InterPro: IPR002539.
       0.538
EFQ84650.1
Class I glutamine amidotransferase; COG: COG0147; Pfam: PF00425,PF00117; InterPro: IPR005801.
     
 0.526
Your Current Organism:
Aeromicrobium marinum
NCBI taxonomy Id: 585531
Other names: A. marinum DSM 15272, Aeromicrobium marinum DSM 15272, Aeromicrobium marinum T2, Aeromicrobium marinum str. DSM 15272, Aeromicrobium marinum strain DSM 15272
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