STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFQ82481.1Monooxygenase, flavin-binding family; COG: COG2072. (505 aa)    
Predicted Functional Partners:
EFQ82480.1
Oxidoreductase, short chain dehydrogenase/reductase family protein; COG: COG1028; Pfam: PF00106; InterPro: IPR016040; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
     0.846
atpA
ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.
    
   0.574
EFQ83847.1
Hypothetical protein; COG: COG2072; 1.14.13.22.
  
  
 
0.534
EFQ82464.1
FAD dependent oxidoreductase; COG: COG2072; Pfam: PF01593.
  
  
 
0.532
EFQ83348.1
Hypothetical protein; COG: COG2072; Pfam: PF00890; 1.14.13.-.
  
  
 
0.528
atpG
ATP synthase F1, gamma subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.
   
   0.480
EFQ82879.1
Glycosyl hydrolase, family 31; Pfam: PF01055; InterPro: IPR000322; Belongs to the glycosyl hydrolase 31 family.
    
   0.442
atpD
ATP synthase F1, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
   
   0.424
EFQ84823.1
enoyl-CoA hydratase/isomerase family protein; COG: COG1024; Pfam: PF00378; InterPro: IPR001753.
  
 
   0.423
EFQ84075.1
Raf-like protein; COG: COG1881; Pfam: PF01161; InterPro: IPR008914.
   
   0.421
Your Current Organism:
Aeromicrobium marinum
NCBI taxonomy Id: 585531
Other names: A. marinum DSM 15272, Aeromicrobium marinum DSM 15272, Aeromicrobium marinum T2, Aeromicrobium marinum str. DSM 15272, Aeromicrobium marinum strain DSM 15272
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.