STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFQ82297.1Virulence factor Mce family protein; COG: COG1463; Pfam: PF02470; InterPro: IPR005693; overlaps another CDS with the same product name. (378 aa)    
Predicted Functional Partners:
EFQ82299.1
Hypothetical protein; COG: COG0767; Pfam: PF02405; InterPro: IPR003453.
 
 0.983
EFQ82298.1
Hypothetical protein; COG: COG0767; Pfam: PF02405; InterPro: IPR003453.
 
 0.980
EFQ82295.1
Virulence factor Mce family protein; COG: COG1463; Pfam: PF02470; InterPro: IPR005693; overlaps another CDS with the same product name.
 
 
 0.967
EFQ82292.1
Virulence factor Mce family protein; COG: COG1463; Pfam: PF02470; InterPro: IPR005693; overlaps another CDS with the same product name.
 
 
 0.964
EFQ84384.1
ABC transporter, ATP-binding protein; COG: COG1127; Pfam: PF00005; InterPro: IPR003593.
 
 0.943
EFQ81873.1
ABC transporter, ATP-binding protein; COG: COG1127; Pfam: PF00005; InterPro: IPR003593.
 
 0.943
EFQ81872.1
Hypothetical protein; COG: COG0767; Pfam: PF02405; InterPro: IPR003453.
 
 0.931
EFQ82291.1
Hypothetical protein.
 
    0.924
EFQ81871.1
Hypothetical protein; COG: COG0767; Pfam: PF02405; InterPro: IPR003453.
 
 0.916
EFQ84375.1
Hypothetical protein; COG: COG0767; Pfam: PF02405; InterPro: IPR003453.
 
 0.915
Your Current Organism:
Aeromicrobium marinum
NCBI taxonomy Id: 585531
Other names: A. marinum DSM 15272, Aeromicrobium marinum DSM 15272, Aeromicrobium marinum T2, Aeromicrobium marinum str. DSM 15272, Aeromicrobium marinum strain DSM 15272
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