STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cofDLPPG:FO 2-phospho-L-lactate transferase; COG: COG0391; Pfam: PF01933; InterPro: IPR002882. (331 aa)    
Predicted Functional Partners:
cofE
F420-0:gamma-glutamyl ligase; COG: COG1478; Pfam: PF01996; InterPro: IPR002847.
 
 
 0.995
EFQ81994.1
2-phospho-L-lactate guanylyltransferase CofC; Pfam: PF01983.
 
  
 0.984
cofH
7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofH subunit; COG: COG1060; Pfam: PF04055; InterPro: IPR013785.
 
  
 0.983
whiA
Hypothetical protein; Involved in cell division and chromosome segregation.
  
  
 0.831
EFQ84119.1
Hypothetical protein; Displays ATPase and GTPase activities.
  
  
 0.678
EFQ83465.1
Luciferase-like monooxygenase; Pfam: PF00296; InterPro: IPR011251.
 
   
 0.675
EFQ82311.1
Putative F420-dependent oxidoreductase, MSMEG_2256 family; COG: COG2141; Pfam: PF00296; InterPro: IPR011251.
 
   
 0.669
rdgB
Non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.
      
 0.639
gap
Glyceraldehyde-3-phosphate dehydrogenase, type I; COG: COG0057; Pfam: PF00044,PF02800; InterPro: IPR000173; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
     
 0.588
npdG
NADPH-dependent F420 reductase; COG: COG2085; Pfam: PF03807; InterPro: IPR016040.
 
     0.558
Your Current Organism:
Aeromicrobium marinum
NCBI taxonomy Id: 585531
Other names: A. marinum DSM 15272, Aeromicrobium marinum DSM 15272, Aeromicrobium marinum T2, Aeromicrobium marinum str. DSM 15272, Aeromicrobium marinum strain DSM 15272
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