Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDJ56356.1 | SDJ56395.1 | SAMN05216187_10187 | SAMN05216187_10188 | Rhodanese-related sulfurtransferase. | Hypothetical protein. | 0.675 |
SDJ56356.1 | SDJ56430.1 | SAMN05216187_10187 | SAMN05216187_10189 | Rhodanese-related sulfurtransferase. | Uncharacterized conserved protein YqhQ. | 0.675 |
SDJ56356.1 | SDJ56473.1 | SAMN05216187_10187 | SAMN05216187_10190 | Rhodanese-related sulfurtransferase. | Hypothetical protein. | 0.675 |
SDJ56356.1 | SDJ56510.1 | SAMN05216187_10187 | SAMN05216187_10191 | Rhodanese-related sulfurtransferase. | Xaa-Pro aminopeptidase. | 0.476 |
SDJ56356.1 | efp | SAMN05216187_10187 | SAMN05216187_10192 | Rhodanese-related sulfurtransferase. | Elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase. | 0.453 |
SDJ56395.1 | SDJ56356.1 | SAMN05216187_10188 | SAMN05216187_10187 | Hypothetical protein. | Rhodanese-related sulfurtransferase. | 0.675 |
SDJ56395.1 | SDJ56430.1 | SAMN05216187_10188 | SAMN05216187_10189 | Hypothetical protein. | Uncharacterized conserved protein YqhQ. | 0.773 |
SDJ56395.1 | SDJ56473.1 | SAMN05216187_10188 | SAMN05216187_10190 | Hypothetical protein. | Hypothetical protein. | 0.786 |
SDJ56395.1 | SDJ56510.1 | SAMN05216187_10188 | SAMN05216187_10191 | Hypothetical protein. | Xaa-Pro aminopeptidase. | 0.577 |
SDJ56395.1 | efp | SAMN05216187_10188 | SAMN05216187_10192 | Hypothetical protein. | Elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase. | 0.547 |
SDJ56430.1 | SDJ56356.1 | SAMN05216187_10189 | SAMN05216187_10187 | Uncharacterized conserved protein YqhQ. | Rhodanese-related sulfurtransferase. | 0.675 |
SDJ56430.1 | SDJ56395.1 | SAMN05216187_10189 | SAMN05216187_10188 | Uncharacterized conserved protein YqhQ. | Hypothetical protein. | 0.773 |
SDJ56430.1 | SDJ56473.1 | SAMN05216187_10189 | SAMN05216187_10190 | Uncharacterized conserved protein YqhQ. | Hypothetical protein. | 0.773 |
SDJ56430.1 | SDJ56510.1 | SAMN05216187_10189 | SAMN05216187_10191 | Uncharacterized conserved protein YqhQ. | Xaa-Pro aminopeptidase. | 0.567 |
SDJ56430.1 | efp | SAMN05216187_10189 | SAMN05216187_10192 | Uncharacterized conserved protein YqhQ. | Elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase. | 0.520 |
SDJ56473.1 | SDJ56356.1 | SAMN05216187_10190 | SAMN05216187_10187 | Hypothetical protein. | Rhodanese-related sulfurtransferase. | 0.675 |
SDJ56473.1 | SDJ56395.1 | SAMN05216187_10190 | SAMN05216187_10188 | Hypothetical protein. | Hypothetical protein. | 0.786 |
SDJ56473.1 | SDJ56430.1 | SAMN05216187_10190 | SAMN05216187_10189 | Hypothetical protein. | Uncharacterized conserved protein YqhQ. | 0.773 |
SDJ56473.1 | SDJ56510.1 | SAMN05216187_10190 | SAMN05216187_10191 | Hypothetical protein. | Xaa-Pro aminopeptidase. | 0.567 |
SDJ56473.1 | efp | SAMN05216187_10190 | SAMN05216187_10192 | Hypothetical protein. | Elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase. | 0.520 |
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