STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ97800.1Zinc-ribbon containing domain-containing protein. (131 aa)    
Predicted Functional Partners:
SDK17836.1
Putative membrane protein.
  
    0.778
SDJ57047.1
Protein of unknown function.
  
     0.775
SDJ58386.1
Hypothetical protein.
  
     0.775
SDJ58924.1
Menaquinol-cytochrome c reductase cytochrome b/c subunit.
  
     0.775
SDJ55105.1
Cytochrome c550.
  
     0.775
SDJ56037.1
Protein of unknown function.
  
     0.775
SDJ72096.1
YugN-like family protein.
  
     0.775
SDK58989.1
Protein of unknown function.
  
     0.775
SDJ71658.1
YlaH-like protein.
  
     0.774
SDJ71963.1
Cytochrome c oxidase subunit 4.
  
     0.774
Your Current Organism:
Jeotgalicoccus halophilus
NCBI taxonomy Id: 586411
Other names: CGMCC 1.8911, J. halophilus, Jeotgalicoccus halophilus Liu et al. 2011, Jeotgalicoccus sp. C1-52, Jeotgalicoccus sp. YD-9, NBRC 105788, strain C1-52
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.