STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDK76625.1Hypothetical protein. (516 aa)    
Predicted Functional Partners:
proC
Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.
       0.579
SDK76551.1
KinB signaling pathway activation protein.
       0.541
SDK76587.1
ATP-binding protein involved in chromosome partitioning; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
       0.541
SDK76698.1
Hemolysin III.
       0.445
SDK76733.1
Putative uridylyltransferase.
       0.443
SDK76767.1
Pyrimidine-nucleoside phosphorylase.
       0.414
SDK76801.1
Hypothetical protein.
       0.400
Your Current Organism:
Jeotgalicoccus halophilus
NCBI taxonomy Id: 586411
Other names: CGMCC 1.8911, J. halophilus, Jeotgalicoccus halophilus Liu et al. 2011, Jeotgalicoccus sp. C1-52, Jeotgalicoccus sp. YD-9, NBRC 105788, strain C1-52
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