STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000724085_00354Unannotated protein. (273 aa)    
Predicted Functional Partners:
GCA_000724085_00353
Unannotated protein.
 
  
 0.978
GCA_000724085_00352
Unannotated protein.
   
 
 0.947
GCA_000724085_02224
Unannotated protein.
   
    0.659
GCA_000724085_01986
Unannotated protein.
 
     0.601
GCA_000724085_00893
Unannotated protein.
   
 
 0.554
GCA_000724085_01078
Unannotated protein.
   
 
 0.554
GCA_000724085_01192
Unannotated protein.
   
 
 0.554
GCA_000724085_00355
Unannotated protein.
       0.482
GCA_000724085_00356
Unannotated protein.
       0.400
Your Current Organism:
Oceanobacillus manasiensis
NCBI taxonomy Id: 586413
Other names: CGMCC 1.9105, NBRC 105903, O. manasiensis, Oceanobacillus sp. YD16, Oceanobacillus sp. YD3-56, Oceanobacillus sp. YH29, strain YD3-56
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.