STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000724085_01392Unannotated protein. (338 aa)    
Predicted Functional Partners:
GCA_000724085_00151
Unannotated protein.
  
 
  0.868
GCA_000724085_00615
Unannotated protein.
  
 
 0.859
GCA_000724085_00746
Unannotated protein.
   
 
 0.840
GCA_000724085_00577
Unannotated protein.
   
 
 0.837
GCA_000724085_01945
Unannotated protein.
  
 
 0.819
GCA_000724085_00868
Unannotated protein.
  
 
 0.770
GCA_000724085_01439
Unannotated protein.
   
 
  0.757
GCA_000724085_00981
Unannotated protein.
     
 0.749
GCA_000724085_00983
Unannotated protein.
     
 0.748
GCA_000724085_02361
Unannotated protein.
   
 
  0.748
Your Current Organism:
Oceanobacillus manasiensis
NCBI taxonomy Id: 586413
Other names: CGMCC 1.9105, NBRC 105903, O. manasiensis, Oceanobacillus sp. YD16, Oceanobacillus sp. YD3-56, Oceanobacillus sp. YH29, strain YD3-56
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.