STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000724085_03293Unannotated protein. (609 aa)    
Predicted Functional Partners:
GCA_000724085_03294
Unannotated protein.
 
 
 0.976
GCA_000724085_00457
Unannotated protein.
  
  0.890
GCA_000724085_03307
Unannotated protein.
  
  0.890
GCA_000724085_00023
Unannotated protein.
  
  0.853
GCA_000724085_00024
Unannotated protein.
  
  0.853
GCA_000724085_02484
Unannotated protein.
  
  0.853
GCA_000724085_01890
Unannotated protein.
 
 
   0.784
GCA_000724085_01616
Unannotated protein.
   
   0.755
GCA_000724085_01033
Unannotated protein.
  
     0.667
GCA_000724085_01751
Unannotated protein.
  
     0.647
Your Current Organism:
Oceanobacillus manasiensis
NCBI taxonomy Id: 586413
Other names: CGMCC 1.9105, NBRC 105903, O. manasiensis, Oceanobacillus sp. YD16, Oceanobacillus sp. YD3-56, Oceanobacillus sp. YH29, strain YD3-56
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.