STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIF66528.1Butanediol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (338 aa)    
Predicted Functional Partners:
AIF68145.1
PTS fructose transporter subunit IIA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.802
AIF66200.1
Threonine dehydratase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA.
   
 0.758
AIF67461.1
PTS mannose transporter subunit IIAB; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.756
AIF67087.1
Pyruvate kinase; Catalyzes the formation of phosphoenolpyruvate from pyruvate; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.736
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
    
  0.712
gatC
PTS system galactitol-specific transporter subunit IIC; With GatAB forms a phosphoenolpyruvate-dependent sugar phosphotransferase transporter for galactitol; subunit IIC forms the translocation channel and contains the substrate binding site; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.663
AIF66744.1
Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.649
AIF66527.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.623
AIF66526.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.606
AIF67121.1
PTS galactitol transporter subunit IIB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.570
Your Current Organism:
Terribacillus aidingensis
NCBI taxonomy Id: 586416
Other names: CGMCC 1.8913, NBRC 105790, T. aidingensis, Terribacillus aidingensis Liu et al. 2010, Terribacillus sp. AECST01, Terribacillus sp. AECST02, Terribacillus sp. AECST03, Terribacillus sp. AECST04, Terribacillus sp. DB2, Terribacillus sp. IA7, Terribacillus sp. YI7-61, strain YI7-61
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