STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIF66826.1Phosphotransferase; Bifunctional serine/threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation/dephosphorylation. (269 aa)    
Predicted Functional Partners:
AIF66827.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.955
glyS
glycine-tRNA synthetase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.810
glyQ
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.733
AIF67087.1
Pyruvate kinase; Catalyzes the formation of phosphoenolpyruvate from pyruvate; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.541
AIF66825.1
Acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.479
AIF66820.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GTP cyclohydrolase I type 2/NIF3 family.
 
     0.458
sigA
RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.
 
   
 0.434
dnaG
DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.
  
  
 0.434
recO
DNA recombination protein RecO; Involved in DNA repair and RecF pathway recombination.
       0.425
AIF68129.1
Central glycolytic genes regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.415
Your Current Organism:
Terribacillus aidingensis
NCBI taxonomy Id: 586416
Other names: CGMCC 1.8913, NBRC 105790, T. aidingensis, Terribacillus aidingensis Liu et al. 2010, Terribacillus sp. AECST01, Terribacillus sp. AECST02, Terribacillus sp. AECST03, Terribacillus sp. AECST04, Terribacillus sp. DB2, Terribacillus sp. IA7, Terribacillus sp. YI7-61, strain YI7-61
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