STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIF68203.1Fe-S cluster assembly protein SufB; Derived by automated computational analysis using gene prediction method: Protein Homology. (465 aa)    
Predicted Functional Partners:
AIF68199.1
Iron ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.999
AIF68201.1
Cysteine desulfurase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
 
 0.985
AIF68200.1
Fe-S cluster assembly protein SufD; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
0.967
AIF68202.1
Nitrogen fixation protein NifU; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.961
AIF66064.1
DNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.782
AIF68227.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HesB/IscA family.
  
 
 0.587
AIF66890.1
Cysteine desulfurase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.466
AIF67110.1
Cysteine desulfurase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.466
AIF68204.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.426
AIF68205.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.414
Your Current Organism:
Terribacillus aidingensis
NCBI taxonomy Id: 586416
Other names: CGMCC 1.8913, NBRC 105790, T. aidingensis, Terribacillus aidingensis Liu et al. 2010, Terribacillus sp. AECST01, Terribacillus sp. AECST02, Terribacillus sp. AECST03, Terribacillus sp. AECST04, Terribacillus sp. DB2, Terribacillus sp. IA7, Terribacillus sp. YI7-61, strain YI7-61
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