STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
17.m07317U1 zinc finger family protein. (128 aa)    
Predicted Functional Partners:
23.m06378
U2 small nuclear ribonucleoprotein A', putative.
   
 
 0.999
BBOV_II005790
U1 snRNP, putative.
   
 0.999
18.m06632
Small nuclear ribonucleoprotein G.
   
 0.999
17.m07530
Sm domain containing protein.
   
 0.998
18.m06196
Small nuclear ribonucleoprotein Sm D3.
   
 0.997
19.m02306
Small nuclear ribonucleoprotein Sm D2.
   
 0.997
21.m02844
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.995
23.m06020
Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.
   
 0.994
23.m05936
Small nuclear ribonucleoprotein F, putative.
   
 0.991
23.m06336
Splicing factor, putative.
   
 0.988
Your Current Organism:
Babesia bovis
NCBI taxonomy Id: 5865
Other names: B. bovis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.