STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
17.m07410RNA recognition motif domain containing protein. (643 aa)    
Predicted Functional Partners:
23.m05998
Nucleolar protein Nop56, putative.
   
 
 0.900
BBOV_III008920
Fibrillarin, putative.
   
 
 0.885
23.m06364
G-patch domain containing protein.
   
 
 0.795
18.m06502
Nucleolar protein NOP5, putative.
   
 
 0.779
23.m06463
RRM domain-containing protein.
   
   0.764
19.m02064
Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.
   
 
 0.674
BBOV_IV007400
MIF4G domain containing protein.
   
 0.653
18.m06288
MIF4G domain containing protein.
   
 0.653
21.m02788
Eukaryotic initiation factor 4G middle domain containing protein.
   
 0.653
21.m02926
RNA binding protein, putative.
   
 
0.624
Your Current Organism:
Babesia bovis
NCBI taxonomy Id: 5865
Other names: B. bovis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.