STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BBOV_III006720Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. (147 aa)    
Predicted Functional Partners:
17.m07583
Uncharacterized protein.
   
 0.999
17.m07585
Sedlin, N-terminal conserved region family protein.
    
 0.999
23.m06348
Trafficking protein particle complex subunit; May play a role in vesicular transport from endoplasmic reticulum to Golgi.
   
 0.999
23.m05740
Uncharacterized protein.
    
 0.999
23.m06000
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
   
 0.999
18.m06533
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. BET3 subfamily.
   
 0.999
21.m02912
Uncharacterized protein.
    
 0.995
18.m06194
Uncharacterized protein.
     
 0.988
17.m10679
Rab1a.
    
 0.940
17.m07097
Rab1b.
    
 0.940
Your Current Organism:
Babesia bovis
NCBI taxonomy Id: 5865
Other names: B. bovis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.