STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
17.m07645Protein kinase domain containing protein. (642 aa)    
Predicted Functional Partners:
21.m02918
Cell division cycle 5-like protein.
    
 
 0.976
BBOV_IV006680
RNA recognition motif containing protein.
   
 
 0.946
17.m07155
Splicing factor, CC1-like family protein.
    
 
 0.736
BBOV_II005790
U1 snRNP, putative.
    
 
 0.732
18.m06220
Splicing factor, arginine/serine-rich 3, putative.
    
 
 0.731
21.m02985
Protein serine/threonine kinase 1.
    
 
0.730
23.m05938
Uncharacterized protein.
    
 
 0.699
18.m06012
RRM domain-containing protein.
    
 
 0.699
18.m06413
RNA recognition motif (RRM)-containing protein.
    
 
 0.699
18.m06371
CSTF2_hinge domain-containing protein.
   
 
 0.638
Your Current Organism:
Babesia bovis
NCBI taxonomy Id: 5865
Other names: B. bovis
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