STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
23.m05845Membrane protein, putative. (544 aa)    
Predicted Functional Partners:
17.m07429
DNA polymerase alpha subunit B family protein.
    
 0.738
23.m05784
DNA polymerase.
   
 0.714
23.m06020
Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.
    
 0.705
21.m02844
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.699
19.m02306
Small nuclear ribonucleoprotein Sm D2.
    
 0.697
21.m03066
Conserved hypothetcial protein.
    
 0.683
23.m05936
Small nuclear ribonucleoprotein F, putative.
    
  0.655
18.m06632
Small nuclear ribonucleoprotein G.
    
  0.644
17.m07250
Ankyrin repeat family protein.
   
 0.621
21.m02955
DNA repair endonuclease, putative.
    
 0.595
Your Current Organism:
Babesia bovis
NCBI taxonomy Id: 5865
Other names: B. bovis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.