STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
23.m06230DNA repair protein Rad23, putatitve. (313 aa)    
Predicted Functional Partners:
23.m06049
Uncharacterized protein.
   
 0.999
18.m06181
VWFA domain-containing protein.
   
 0.998
19.m02863
UBX domain-containing protein.
    
 0.993
23.m05991
Proteasome 26S regulatory subunit, putative.
   
 0.978
BBOV_IV003190
Ubiquitin / ribosomal protein CEP52.
   
 0.972
23.m06008
26S protease regulatory subunit 4, putative; Belongs to the AAA ATPase family.
   
 0.965
23.m06424
U box domain containing protein.
   
 0.949
BBOV_II007480
26S proteasome regulatory subunit, putative.
   
 0.947
17.m07250
Ankyrin repeat family protein.
   
 0.941
19.m02035
ATPase ASNA1 homolog; ATPase required for the post-translational delivery of tail- anchored (TA) proteins to the endoplasmic reticulum. Recognizes and selectively binds the transmembrane domain of TA proteins in the cytosol. This complex then targets to the endoplasmic reticulum by membrane-bound receptors, where the tail-anchored protein is released for insertion. This process is regulated by ATP binding and hydrolysis. ATP binding drives the homodimer towards the closed dimer state, facilitating recognition of newly synthesized TA membrane proteins. ATP hydrolysis is required for ins [...]
   
 0.940
Your Current Organism:
Babesia bovis
NCBI taxonomy Id: 5865
Other names: B. bovis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.