STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
23.m06148HECT/ubiquitin-transferase domain containing protein. (4713 aa)    
Predicted Functional Partners:
BBOV_II004260
Ran binding-like protein 1.
   
 0.894
BBOV_IV010920
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
    
 0.815
18.m06146
Histone H2A; Belongs to the histone H2A family.
    
 0.684
17.m07661
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.668
17.m10565
Cullin domain-containing protein; Belongs to the cullin family.
    
 0.667
18.m06504
Subtilisin-like protein, putative.
  
 
 0.634
19.m02134
CSL zinc finger domain containing protein.
    
 
 0.602
17.m07856
Importin subunit alpha; Belongs to the importin alpha family.
   
 
 0.600
18.m06315
Uncharacterized protein.
   
 
 0.600
21.m02797
Zinc finger protein, putative.
   
 0.588
Your Current Organism:
Babesia bovis
NCBI taxonomy Id: 5865
Other names: B. bovis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.