STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
18.m06505NPL4 family protein. (480 aa)    
Predicted Functional Partners:
23.m05946
Ubiquitin fusion degradation protein UFD1, putative.
   
 0.995
BBOV_II005920
Ubiquitin fusion degradation protein, putative.
   
 0.995
18.m06401
WD domain, G-beta repeat containing protein.
   
 
 0.994
23.m05756
Cell division control protein 48, putative.
   
 0.993
21.m02769
Cell division cycle protein ATPase, putative; Belongs to the AAA ATPase family.
   
 0.993
23.m06424
U box domain containing protein.
    
 
 0.988
17.m07744
Ribosomal protein S27a family protein.
   
 0.982
21.m02893
UBX domain-containing protein.
   
 
 0.977
17.m10652
Uncharacterized protein.
    
 0.950
BBOV_IV003190
Ubiquitin / ribosomal protein CEP52.
    
  0.942
Your Current Organism:
Babesia bovis
NCBI taxonomy Id: 5865
Other names: B. bovis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.