STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
18.m06535RING-type domain-containing protein. (271 aa)    
Predicted Functional Partners:
BBOV_IV003190
Ubiquitin / ribosomal protein CEP52.
    
 0.777
17.m07744
Ribosomal protein S27a family protein.
   
 0.750
18.m06504
Subtilisin-like protein, putative.
   
 0.724
17.m07863
Ubiquitin-conjugating enzyme E2, putative.
   
 0.683
23.m05993
Ubiquitin-conjugating enzyme E2, putative; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.683
23.m05926
Ubiquitin-conjugating enzyme, putative; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.683
21.m02810
Ubiquitin-conjugating enzyme E2; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.683
21.m03009
Ubiquitin transferase, HECT domain containing protein.
   
 
 0.681
17.m07202
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.650
BBOV_III010050
Ubiquitin family protein.
   
 0.649
Your Current Organism:
Babesia bovis
NCBI taxonomy Id: 5865
Other names: B. bovis
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.